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DRX241710: Illumina HiSeq 2500 sequencing of SAMD00252975
1 ILLUMINA (Illumina HiSeq 2500) run: 5.6M spots, 565.9M bases, 290.5Mb downloads

Submitted by: Genome Information Research Center of RIMD in Osaka University (GIRC)
Study: International collaborative studies on the prevention, diagnosis, and drug discovery for diarrheal infectious diseases in India
show Abstracthide Abstract
Many diarrhea patients emerge every year in Kolkata, India. The identification of the causative microorganism is very important for treatment of infectious diarrheal diseases. The laboratory examination has been most frequently used for the detection of the agents responsible for the diarrhea. However, the etiological agents have not detected by the method in about 30% stool samples of patients. In addition, it is not clear that the agents responsible for the diarrhea are detected correctly, because the quantitative analysis of the agent in stool has not been carried out. To dissolve these problems, the metagenomic analyses of the stool samples of diarrhea patients in Kolkata were carried out. Especially, the analysis of stool samples of cholera patients was focused in this report.
Sample: gut microbiomes isolated from feces of Indian patient 1007
SAMD00252975 • DRS304729 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Construction protocol:
Spot descriptor:
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Runs: 1 run, 5.6M spots, 565.9M bases, 290.5Mb
Run# of Spots# of BasesSizePublished
DRR2519535,602,932565.9M290.5Mb2023-05-16

ID:
27788723

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